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Items: 1 to 20 of 21545

1.
Capturing Differential Allele-Level Expression and Genotypes of All Classical HLA Loci and Haplotypes by a New Capture RNA-Seq Method
Fumiko Yamamoto, Shingo Suzuki, Akiko Mizutani, Atsuko Shigenari, Sayaka Ito, Yoshie Kametani, Shunichi Kato, Marcelo Fernandez-Viña, Makoto Murata, Satoko Morishima, Yasuo Morishima, Masafumi Tanaka, Jerzy K. Kulski, Seiamak Bahram, Takashi Shiina
Front Immunol. 2020; 11: 941. Published online 2020 May 29. doi: 10.3389/fimmu.2020.00941
PMCID:
PMC7272581
ArticlePDF–1.1M
2.
A low‐cost, sensitive and specific PCR‐based tool for rapid clinical detection of HLA‐B*35 alleles associated with delayed drug hypersensitivity reactions
Yueran Li, Pooja Deshpande, Abha Chopra, Linda Choo, Andrew Gibson, Elizabeth J. Phillips
HLA. 2022 Dec; 100(6): 610–616. Published online 2022 Aug 26. doi: 10.1111/tan.14767
PMCID:
PMC9804599
ArticlePDF–1.7M
3.
Next-generation HLA typing of 382 International Histocompatibility Working Group reference B-Lymphoblastoid cell lines: report from the 17th International HLA and Immunogenetics Workshop
Lisa E. Creary, Sandra G. Guerra, Winnie Chong, Colin J. Brown, Thomas R. Turner, James Robinson, Will P. Bultitude, Neema P. Mayor, Steven G.E. Marsh, Katsuyuki Saito, Kevin Lam, Jamie L. Duke, Timothy L. Mosbruger, Deborah Ferriola, Dimitrios Monos, Amanda Willis, Medhat Askar, Gottfried Fischer, Chee Loong Saw, Jiannis Ragoussis, Martin Petrek, Carles Serra-Pagés, Manel Juan, Catherine Stavropoulos-Giokas, Amalia Dinou, Reem Ameen, Salem Al Shemmari, Eric Spierings, Ketevan Gendzekhadze, Gerald P. Morris, Qiuheng Zhang, Zahra Kashi, Susan Hsu, Sridevi Gangavarapu, Kalyan C. Mallempati, Fumiko Yamamoto, Kazutoyo Osoegawa, Tamara Vayntrub, Chia-Jung Chang, John A. Hansen, Marcelo A. Fernández-Viňa
Hum Immunol. Author manuscript; available in PMC 2019 Jul 1.
Published in final edited form as: Hum Immunol. 2019 Jul; 80(7): 449–460. Published online 2019 Mar 4. doi: 10.1016/j.humimm.2019.03.001
PMCID:
PMC6599558
ArticlePDF–484K
4.
High-resolution HLA allele and haplotype frequencies in several unrelated populations determined by next generation sequencing: 17th International HLA and Immunogenetics Workshop joint report
Lisa E. Creary, Nicoletta Sacchi, Michela Mazzocco, Gerald P. Morris, Gonzalo Montero-Martin, Winnie Chong, Colin J. Brown, Amalia Dinou, Catherine Stavropoulos-Giokas, Clara Gorodezky, Saranya Narayan, Srinivasan Periathiruvadi, Rasmi Thomas, Dianne De Santis, Jennifer Pepperall, Gehad E. ElGhazali, Zain Al Yafei, Medhat Askar, Shweta Tyagi, Uma Kanga, Susana R. Marino, Dolores Planelles, Chia-Jung Chang, Marcelo A. Fernández-Viña
Hum Immunol. Author manuscript; available in PMC 2022 Jul 1.
Published in final edited form as: Hum Immunol. 2021 Jul; 82(7): 505–522. Published online 2021 May 24. doi: 10.1016/j.humimm.2021.04.007
PMCID:
PMC8315142
ArticlePDF–965K
5.
HLA‐EMMA: A user‐friendly tool to analyse HLA class I and class II compatibility on the amino acid level
Cynthia S. M. Kramer, Johan Koster, Geert W. Haasnoot, Dave L. Roelen, Frans H. J. Claas, Sebastiaan Heidt
HLA. 2020 Jul; 96(1): 43–51. Published online 2020 Apr 13. doi: 10.1111/tan.13883
PMCID:
PMC7317360
ArticlePDF–1.5M
6.
Deciphering the fine nucleotide diversity of full HLA class I and class II genes in a well‐documented population from sub‐Saharan Africa
T. Goeury, L. E. Creary, L. Brunet, M. Galan, M. Pasquier, B. Kervaire, A. Langaney, J.‐M. Tiercy, M. A. Fernández‐Viña, J. M. Nunes, A. Sanchez‐Mazas
HLA. 2018 Jan; 91(1): 36–51. Published online 2017 Dec 25. doi: 10.1111/tan.13180
PMCID:
PMC5767763
ArticlePDF–1.8M
7.
Identification of trophoblast-specific elements in the HLA-C core promoter
Jenna K. Johnson, Paul W. Wright, Hongchuan Li, Stephen K. Anderson
HLA. Author manuscript; available in PMC 2019 Nov 1.
Published in final edited form as: HLA. 2018 Nov; 92(5): 288–297. Published online 2018 Oct 30. doi: 10.1111/tan.13404
PMCID:
PMC6251741
ArticlePDF–1.1M
8.
HLA-G/ILTs Targeted Solid Cancer Immunotherapy: Opportunities and Challenges
Aifen Lin, Wei-Hua Yan
Front Immunol. 2021; 12: 698677. Published online 2021 Jun 30. doi: 10.3389/fimmu.2021.698677
PMCID:
PMC8278316
ArticlePDF–4.8M
9.
Common, intermediate and well‐documented HLA alleles in world populations: CIWD version 3.0.0
Carolyn K. Hurley, Jane Kempenich, Kim Wadsworth, Jürgen Sauter, Jan A. Hofmann, Daniel Schefzyk, Alexander H. Schmidt, Pablo Galarza, Maria B. R. Cardozo, Malgorzata Dudkiewicz, Lucie Houdova, Pavel Jindra, Betina S. Sorensen, Latha Jagannathan, Ankit Mathur, Tiina Linjama, Tigran Torosian, Rafi Freudenberger, Anastasios Manolis, John Mavrommatis, Nezih Cereb, Sigal Manor, Nira Shriki, Nicoletta Sacchi, Reem Ameen, Raewyn Fisher, Heather Dunckley, Irene Andersen, Ahmed Alaskar, Mohsen Alzahrani, Ali Hajeer, Dunia Jawdat, Grazia Nicoloso, Pawinee Kupatawintu, Louise Cho, Ashminder Kaur, Mats Bengtsson, Jason Dehn
HLA. 2020 Jun; 95(6): 516–531. Published online 2020 Jan 31. doi: 10.1111/tan.13811
PMCID:
PMC7317522
ArticlePDF–1.9M
10.
HLA class I variation in Iranian Lur and Kurd populations: High Haplotype and Allotype Diversity with an Abundance of KIR Ligands
Elham Ashouri, Paul J. Norman, Lisbeth A. Guethlein, Alex Seungmo Han, Neda Nemat-Gorgani, Steve J. Norberg, Abbas Ghaderi, Peter Parham
HLA. Author manuscript; available in PMC 2017 Sep 1.
Published in final edited form as: HLA. 2016 Sep; 88(3): 87–99. Published online 2016 Aug 24. doi: 10.1111/tan.12852
PMCID:
PMC5063635
ArticlePDF–2.2M
11.
On the clinical relevance of using complete high-resolution HLA typing for an accurate interpretation of posttransplant immune-mediated graft outcomes
Maria Meneghini, Anna Perona, Elena Crespo, Frederike Bemelman, Petra Reinke, Ondrej Viklicky, Magali Giral, Eduard Palou, Alba Torija, Laura Donadeu, Edoardo Melilli, Jose Zuñiga, Anett Sefrin, Nils Lachmann, Liu Hu, Petra Hruba, Cécile Guillot-Gueguen, Sophie Brouard, Josep Grinyo, Oriol Bestard
Front Immunol. 2022; 13: 924825. Published online 2022 Sep 29. doi: 10.3389/fimmu.2022.924825
PMCID:
PMC9559221
ArticlePDF–1.2M
12.
Narcolepsy type I-associated DNA methylation and gene expression changes in the human leukocyte antigen region
Kugui Yoshida-Tanaka, Mihoko Shimada, Yoshiko Honda, Akihiro Fujimoto, Katsushi Tokunaga, Makoto Honda, Taku Miyagawa
Sci Rep. 2023; 13: 10464. Published online 2023 Jun 28. doi: 10.1038/s41598-023-37511-4
PMCID:
PMC10307834
ArticlePDF–1.5M
13.
A novel framework for human leukocyte antigen (HLA) genotyping using probe capture-based targeted next-generation sequencing and computational analysis
Sheng-Kai Lai, Allen Chilun Luo, I-Hsuan Chiu, Hui-Wen Chuang, Ting-Hsuan Chou, Tsung-Kai Hung, Jacob Shujui Hsu, Chien-Yu Chen, Wei-Shiung Yang, Ya-Chien Yang, Pei-Lung Chen
Comput Struct Biotechnol J. 2024 Dec; 23: 1562–1571. Published online 2024 Apr 2. doi: 10.1016/j.csbj.2024.03.030
PMCID:
PMC11035020
ArticlePDF–2.8M
14.
Association between human leukocyte antigen gene polymorphisms and multiple EPIYA-C repeats in gastrointestinal disorders
Suat Saribas, Suleyman Demiryas, Erkan Yilmaz, Omer Uysal, Nuray Kepil, Mehmet Demirci, Reyhan Caliskan, Harika Oyku Dinc, Seher Akkus, Nesrin Gareayaghi, Sahra Kirmusaoglu, Dogukan Ozbey, Hrisi B Tokman, Serdar S Koksal, Ihsan Tasci, Bekir Kocazeybek
World J Gastroenterol. 2020 Aug 28; 26(32): 4817–4832. Published online 2020 Aug 28. doi: 10.3748/wjg.v26.i32.4817
PMCID:
PMC7459208
ArticlePDF–605K
15.
Simultaneous detection of DNA variation and methylation at HLA class II locus and immune gene promoters using targeted SureSelect Methyl-Sequencing
Maria Kalomoiri, Chandana Rao Prakash, Sonja Lagström, Kai Hauschulz, Ewoud Ewing, Klementy Shchetynsky, Lara Kular, Maria Needhamsen, Maja Jagodic
Front Immunol. 2023; 14: 1251772. Published online 2023 Aug 24. doi: 10.3389/fimmu.2023.1251772
PMCID:
PMC10484099
ArticlePDF–3.8M
16.
Characterization of HLA-G Regulation and HLA Expression in Breast Cancer and Malignant Melanoma Cell Lines upon IFN-γ Stimulation and Inhibition of DNA Methylation
Nanna Jørgensen, Abid Sayed, Helene Bjerregaard Jeppesen, Gry Persson, Iben Weisdorf, Tina Funck, Thomas Vauvert Faurschou Hviid
Int J Mol Sci. 2020 Jun; 21(12): 4307. Published online 2020 Jun 17. doi: 10.3390/ijms21124307
PMCID:
PMC7352735
ArticlePDF–3.8M
17.
Is multiple sclerosis progression associated with the HLA-DR15 haplotype?
Klarissa Hanja Stürner, Inessa Siembab, Gerhard Schön, Jan-Patrick Stellmann, Nika Heidari, Boris Fehse, Christoph Heesen, Thomas H Eiermann, Roland Martin, Thomas MC Binder
Mult Scler J Exp Transl Clin. 2019 Oct-Dec; 5(4): 2055217319894615. Published online 2019 Dec 9. doi: 10.1177/2055217319894615
PMCID:
PMC6902395
ArticlePDF–745K
18.
Comparison of sequence‐specific oligonucleotide probe vs next generation sequencing for HLA‐A, B, C, DRB1, DRB3/B4/B5, DQA1, DQB1, DPA1, and DPB1 typing: Toward single‐pass high‐resolution HLA typing in support of solid organ and hematopoietic cell transplant programs
Anajane G. Smith, Shalini Pereira, Andrés Jaramillo, Scott T. Stoll, Faisal M. Khan, Noureddine Berka, Ahmed A. Mostafa, Marcelo J. Pando, Crystal Y. Usenko, Maria P. Bettinotti, Chul‐Woo Pyo, Wyatt C. Nelson, Amanda Willis, Medhat Askar, Daniel E. Geraghty
HLA. 2019 Sep; 94(3): 296–306. Published online 2019 Jul 15. doi: 10.1111/tan.13619
PMCID:
PMC6772026
ArticlePDF–2.0M
19.
HCMV triggers frequent and persistent UL40-specific unconventional HLA-E-restricted CD8 T-cell responses with potential autologous and allogeneic peptide recognition
Nicolas Jouand, Céline Bressollette-Bodin, Nathalie Gérard, Magali Giral, Pierrick Guérif, Audrey Rodallec, Romain Oger, Tiphaine Parrot, Mathilde Allard, Anne Cesbron-Gautier, Nadine Gervois, Béatrice Charreau
PLoS Pathog. 2018 Apr; 14(4): e1007041. Published online 2018 Apr 30. doi: 10.1371/journal.ppat.1007041
PMCID:
PMC5945056
ArticlePDF–7.5M
20.
HLA-B*07, HLA-DRB1*07, HLA-DRB1*12, and HLA-C*03:02 Strongly Associate With BMI: Data From 1.3 Million Healthy Chinese Adults
Jie Shen, Tingwei Guo, Tao Wang, Yisong Zhen, Xiao Ma, Yuan Wang, Zhi-Xin Zhang, Jian-Ping Cai, Wei Mao, Fa-Ming Zhu, Jian-Ping Li, Zhen-Lei Wang, De-Mei Zhang, Meng-Li Liu, Xiao-Yan Shan, Bo-Wei Zhang, Chuan-Fu Zhu, Zhi-Hui Deng, Wei-Jian Yu, Qiang Chen, Guo-Liang Li, Tao Yang, Shan Lu, Qin-Qin Pan, Su Fan, Xiao-Yan Wang, Xing Zhao, Xin-Yun Bi, Yan-Hui Qiao, Pin-Can Su, Rong Lv, Guo-Ying Li, Heng-Cong Li, Bin Pei, Li-Xin Jiao, Gang Shen, Jie Liu, Zhi-Hui Feng, Yu-Ping Su, Yu-Bin Xie, Wen-Ying Di, Xin-Yu Wang, Xiang Liu, Xiao-Ping Zhang, Dan Du, Qi Liu, Ying Han, Jia-Wei Chen, Min Gu, Leslie J. Baier
Diabetes. 2018 May; 67(5): 861–871. Published online 2018 Feb 26. doi: 10.2337/db17-0852
PMCID:
PMC6463754
ArticlePDF–1.3M

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